MICAS: Microsatellite Analysis Server 3.0

All Non-Coding Repeats of Borrelia afzelii PKo plasmid cp32-12

Total Repeats: 84

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_017225	TAT	2	6	30	35	33.33 %	66.67 %	0 %	0 %	Non-Coding
2	NC_017225	AC	3	6	36	41	50 %	0 %	0 %	50 %	Non-Coding
3	NC_017225	TAA	2	6	46	51	66.67 %	33.33 %	0 %	0 %	Non-Coding
4	NC_017225	AGG	2	6	3347	3352	33.33 %	0 %	66.67 %	0 %	Non-Coding
5	NC_017225	AGG	2	6	3941	3946	33.33 %	0 %	66.67 %	0 %	Non-Coding
6	NC_017225	T	6	6	15140	15145	0 %	100 %	0 %	0 %	Non-Coding
7	NC_017225	TA	3	6	15166	15171	50 %	50 %	0 %	0 %	Non-Coding
8	NC_017225	TA	3	6	15175	15180	50 %	50 %	0 %	0 %	Non-Coding
9	NC_017225	T	6	6	15357	15362	0 %	100 %	0 %	0 %	Non-Coding
10	NC_017225	GGAAAT	2	12	15369	15380	50 %	16.67 %	33.33 %	0 %	Non-Coding
11	NC_017225	A	6	6	15390	15395	100 %	0 %	0 %	0 %	Non-Coding
12	NC_017225	GTT	2	6	16440	16445	0 %	66.67 %	33.33 %	0 %	Non-Coding
13	NC_017225	CTAA	2	8	16486	16493	50 %	25 %	0 %	25 %	Non-Coding
14	NC_017225	ATA	2	6	16502	16507	66.67 %	33.33 %	0 %	0 %	Non-Coding
15	NC_017225	AAT	2	6	17058	17063	66.67 %	33.33 %	0 %	0 %	Non-Coding
16	NC_017225	TCT	2	6	17095	17100	0 %	66.67 %	0 %	33.33 %	Non-Coding
17	NC_017225	AAT	3	9	17116	17124	66.67 %	33.33 %	0 %	0 %	Non-Coding
18	NC_017225	TAG	2	6	17140	17145	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
19	NC_017225	AAT	2	6	17147	17152	66.67 %	33.33 %	0 %	0 %	Non-Coding
20	NC_017225	A	6	6	17172	17177	100 %	0 %	0 %	0 %	Non-Coding
21	NC_017225	GGAGA	2	10	17178	17187	40 %	0 %	60 %	0 %	Non-Coding
22	NC_017225	TAT	2	6	18803	18808	33.33 %	66.67 %	0 %	0 %	Non-Coding
23	NC_017225	TAAAAT	2	12	18892	18903	66.67 %	33.33 %	0 %	0 %	Non-Coding
24	NC_017225	ATTT	2	8	18906	18913	25 %	75 %	0 %	0 %	Non-Coding
25	NC_017225	TTA	2	6	18938	18943	33.33 %	66.67 %	0 %	0 %	Non-Coding
26	NC_017225	TAA	2	6	18951	18956	66.67 %	33.33 %	0 %	0 %	Non-Coding
27	NC_017225	T	7	7	18970	18976	0 %	100 %	0 %	0 %	Non-Coding
28	NC_017225	ATTA	2	8	19018	19025	50 %	50 %	0 %	0 %	Non-Coding
29	NC_017225	A	6	6	19035	19040	100 %	0 %	0 %	0 %	Non-Coding
30	NC_017225	A	6	6	20168	20173	100 %	0 %	0 %	0 %	Non-Coding
31	NC_017225	TAA	2	6	20193	20198	66.67 %	33.33 %	0 %	0 %	Non-Coding
32	NC_017225	A	6	6	22133	22138	100 %	0 %	0 %	0 %	Non-Coding
33	NC_017225	T	6	6	22151	22156	0 %	100 %	0 %	0 %	Non-Coding
34	NC_017225	TAT	2	6	22161	22166	33.33 %	66.67 %	0 %	0 %	Non-Coding
35	NC_017225	TGA	2	6	22177	22182	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
36	NC_017225	A	6	6	22191	22196	100 %	0 %	0 %	0 %	Non-Coding
37	NC_017225	ATTTT	2	10	22201	22210	20 %	80 %	0 %	0 %	Non-Coding
38	NC_017225	T	7	7	22270	22276	0 %	100 %	0 %	0 %	Non-Coding
39	NC_017225	T	7	7	22347	22353	0 %	100 %	0 %	0 %	Non-Coding
40	NC_017225	TTA	2	6	22379	22384	33.33 %	66.67 %	0 %	0 %	Non-Coding
41	NC_017225	TAA	2	6	22405	22410	66.67 %	33.33 %	0 %	0 %	Non-Coding
42	NC_017225	T	6	6	22416	22421	0 %	100 %	0 %	0 %	Non-Coding
43	NC_017225	T	6	6	22428	22433	0 %	100 %	0 %	0 %	Non-Coding
44	NC_017225	ATA	2	6	22466	22471	66.67 %	33.33 %	0 %	0 %	Non-Coding
45	NC_017225	ATA	2	6	22480	22485	66.67 %	33.33 %	0 %	0 %	Non-Coding
46	NC_017225	AT	3	6	22501	22506	50 %	50 %	0 %	0 %	Non-Coding
47	NC_017225	TGG	2	6	22525	22530	0 %	33.33 %	66.67 %	0 %	Non-Coding
48	NC_017225	T	6	6	22573	22578	0 %	100 %	0 %	0 %	Non-Coding
49	NC_017225	A	6	6	22604	22609	100 %	0 %	0 %	0 %	Non-Coding
50	NC_017225	TTATA	2	10	22618	22627	40 %	60 %	0 %	0 %	Non-Coding
51	NC_017225	AT	3	6	22633	22638	50 %	50 %	0 %	0 %	Non-Coding
52	NC_017225	A	8	8	22642	22649	100 %	0 %	0 %	0 %	Non-Coding
53	NC_017225	TAT	2	6	22655	22660	33.33 %	66.67 %	0 %	0 %	Non-Coding
54	NC_017225	TA	3	6	22700	22705	50 %	50 %	0 %	0 %	Non-Coding
55	NC_017225	T	8	8	22724	22731	0 %	100 %	0 %	0 %	Non-Coding
56	NC_017225	TA	3	6	22773	22778	50 %	50 %	0 %	0 %	Non-Coding
57	NC_017225	ATT	3	9	22779	22787	33.33 %	66.67 %	0 %	0 %	Non-Coding
58	NC_017225	A	6	6	22792	22797	100 %	0 %	0 %	0 %	Non-Coding
59	NC_017225	A	6	6	24149	24154	100 %	0 %	0 %	0 %	Non-Coding
60	NC_017225	A	7	7	24157	24163	100 %	0 %	0 %	0 %	Non-Coding
61	NC_017225	AAGTAA	2	12	25430	25441	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
62	NC_017225	AT	3	6	25447	25452	50 %	50 %	0 %	0 %	Non-Coding
63	NC_017225	TGCA	2	8	25516	25523	25 %	25 %	25 %	25 %	Non-Coding
64	NC_017225	CA	3	6	25579	25584	50 %	0 %	0 %	50 %	Non-Coding
65	NC_017225	ATACT	2	10	25591	25600	40 %	40 %	0 %	20 %	Non-Coding
66	NC_017225	TG	3	6	25602	25607	0 %	50 %	50 %	0 %	Non-Coding
67	NC_017225	AT	3	6	25608	25613	50 %	50 %	0 %	0 %	Non-Coding
68	NC_017225	AATTT	2	10	25628	25637	40 %	60 %	0 %	0 %	Non-Coding
69	NC_017225	CAT	2	6	25669	25674	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
70	NC_017225	GA	3	6	25683	25688	50 %	0 %	50 %	0 %	Non-Coding
71	NC_017225	ATTA	2	8	25752	25759	50 %	50 %	0 %	0 %	Non-Coding
72	NC_017225	A	6	6	25771	25776	100 %	0 %	0 %	0 %	Non-Coding
73	NC_017225	TTA	2	6	25783	25788	33.33 %	66.67 %	0 %	0 %	Non-Coding
74	NC_017225	TTA	3	9	25798	25806	33.33 %	66.67 %	0 %	0 %	Non-Coding
75	NC_017225	TAAA	2	8	27529	27536	75 %	25 %	0 %	0 %	Non-Coding
76	NC_017225	A	6	6	27559	27564	100 %	0 %	0 %	0 %	Non-Coding
77	NC_017225	ATT	2	6	27567	27572	33.33 %	66.67 %	0 %	0 %	Non-Coding
78	NC_017225	ATCT	2	8	27965	27972	25 %	50 %	0 %	25 %	Non-Coding
79	NC_017225	ATAA	2	8	27986	27993	75 %	25 %	0 %	0 %	Non-Coding
80	NC_017225	ATTTAA	2	12	28009	28020	50 %	50 %	0 %	0 %	Non-Coding
81	NC_017225	AGT	2	6	28042	28047	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
82	NC_017225	TAA	2	6	28048	28053	66.67 %	33.33 %	0 %	0 %	Non-Coding
83	NC_017225	AAG	2	6	28059	28064	66.67 %	0 %	33.33 %	0 %	Non-Coding
84	NC_017225	TTA	2	6	28119	28124	33.33 %	66.67 %	0 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.